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Greek Yogurt Chocolate Chip Muffins

These greek yogurt muffins are light and fluffy, sweetened naturally with pure maple syrup, and packed full of protein! Guaranteed to be a new favorite muffin recipe in your house. 

greek yogurt chocolate chip muffin

Why we love these greek yogurt muffins

  • light and fluffy: thanks to greek yogurt, these are the best texture
  • full of protein: (9g each!)
  • kid approved: my kids love these, and don’t know they’re healthy!
  • super easy to make: the best kind of recipe if you ask me
  • made from pantry ingredients: whip these up anytime!

Who doesn’t love chocolate chip muffins for breakfast? Greek yogurt chocolate chip muffins are the ultimate breakfast muffin that everyone in your family will love. These are gone so fast every time I make them!

These greek yogurt muffins have become such a favorite in our house that I went on to also make these mini chocolate chip muffins using the same ingredients and even these mini blueberry muffins using similar ingredients.

These healthier chocolate chip muffins are perfect for when I have that sweet tooth. 

a hand holding a chocolate chip muffin

The full ingredient amounts and instructions can be found at the bottom of the post in the recipe card, but here’s what you’ll need to make these.

Ingredients needed

  • greek yogurt: the plain whole milk unsweetened version
  • coconut oil: measured solid, then melted
  • eggs
  • vanilla extract
  • salt
  • baking powder
  • baking soda
  • real maple syrup: one of our favorite natural sweeteners
  • flour: whole wheat pastry flour or all-purpose flour
  • mini chocolate chips: you can use semi-sweet or dark chocolate
greek yogurt chocolate chip muffin with bite taken out

how to make chocolate chip muffins with greek yogurt

Step 1: Whisk together the dry ingredients in a mixing bowl: flour, baking powder, baking soda, and salt.

a container full of greek yogurt

Step 2: In a separate mixing bowl, whisk together the greek yogurt, maple syrup, eggs, vanilla, and melted coconut oil.

Step 3: Add the dry ingredients to the wet, and mix together with a rubber spatula until just combined. Do not over mix, as this will result in dense muffins.

a mixing bowl with wet ingredients and flour on top

Step 4: Reserve a few spoonfuls of chocolate chips to top the muffins, and fold the rest into the batter using a rubber spatula.

a mixing bowl with batter and topped with mini chocolate chips

Now that you have added the mini chocolate chips, your batter will look like this. 

mixed together muffin batter in a bowl with rubber spatula

Step 5: Line a muffin tin with parchment paper muffin liners. I use these every time I make muffins, as they won’t stick to the wrapper at all! If you don’t use liners, use cooking spray first to the muffin tin before adding the batter.

I like using a cookie scoop for filling the muffin tins with batter as it is just the right amount.

Step 6: Sprinkle the tops of the muffins with additional mini chocolate chips.

a hand grabbing a muffin

Step 7: Bake the healthy chocolate chip muffins at 350 degrees for around 20 minutes, or until a toothpick inserted comes out clean. 

two muffins stacked on top of each other

Oh my gosh! These are by far the best muffins I’ve ever made. My husband said they tasted like chocolate chip cookies. I had to intervene because he would have ate half the pan hahaha! My kids also loved them. Thank you for this delicious, yet healthy muffin recipe.

greek yogurt chocolate chip muffin

Can I freeze these chocolate chip muffins?

Yes! One of my favorite things is to have extra muffins in the freezer. These can be stored in an airtight container or bag in the freezer for 2-3 months. Simply pop one out and microwave it for 20-30 seconds for a quick and yummy breakfast or snack.

greek yogurt chocolate chip muffin with a bite taken out

Are you making this recipe? I want to see! Don’t forget to tag me on instagram @buildyourbite and hashtag #buildyourbite with your recipe creations!

More muffin recipes you’ll love

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greek yogurt chocolate chip muffin with bite taken out

Greek Yogurt Muffins FAQs

Why do you put greek yogurt in muffins?

Greek yogurt adds moisture to muffins and gives them a delicious light and fluffy texture.

Do I have to use whole wheat pastry flour?

No, you can substitute all-purpose flour in an equal amount.

How do you store muffins made with greek yogurt?

These can be stored in an airtight bag or container in the refrigerator for 4-5 days, or in the freezer for 2-3 months.

Did you make this recipe? Be sure to leave a star rating below!

Did you make this recipe? Be sure to leave a star rating below!

chocolate chip muffin

Greek Yogurt Muffins with Chocolate Chips

Yield: 12
Prep Time: 10 minutes
Cook Time: 20 minutes
Total Time: 30 minutes

These greek yogurt muffins are light and fluffy, sweetened naturally with pure maple syrup, and packed full of protein!

Ingredients

  • 1 cup plain whole fat greek yogurt
  • ¼ cup coconut oil, melted
  • 2 eggs
  • 1 tablespoon vanilla extract
  • ¼ teaspoon salt
  • 1 teaspoon baking powder
  • ½ teaspoon baking soda
  • ½ cup real maple syrup
  • 1 ½ cups whole wheat pastry flour or all purpose flour
  • 1 cup mini semi sweet chocolate chips

Instructions

  1. In a bowl, whisk together the flour, salt, baking soda, and baking powder
  2. In a separate mixing bowl, whisk together the greek yogurt, maple syrup, eggs, vanilla, and melted coconut oil
  3. Add the dry ingredients to the wet, and mix together with a rubber spatula until just combined (be careful not to over mix)
  4. Reserve a few spoonfuls of chocolate chips to top the muffins, and fold the rest into the batter
  5. Line a muffin tin with parchment paper muffin liners, or use cooking spray for regular liners or no liners
  6. Divide the muffin batter into the 12 cups, then top with the reserved chocolate chips
  7. Bake the healthy chocolate chip muffins at 350 degrees for 18 - 22 minutes, or until a toothpick inserted comes out clean

Notes

Tips for light and fluffy texture

Be sure not to over mix the batter, as this will result in too dense muffins. The key is to mix until just combined, the same goes when you add in the chocolate chips.

How do I measure the coconut oil?

Measure the coconut oil while solid, then melt in the microwave for 15 - 45 seconds until it turns to liquid.

Can I freeze these muffins?

Yes! Simply allow the muffins to cool, then store in an a ziploc bag in your freezer. Once you are ready to eat one, microwave it 15 - 30 seconds until warm.

Can I use a different flour?

Yes! You can substitute whole wheat pastry flour for all purpose. If you want are looking for a gluten free version, try my Gluten Free Chocolate Chip Muffins

Nutrition Information:
Yield: 12 Serving Size: 1
Amount Per Serving: Calories: 313Total Fat: 12gSaturated Fat: 7gTrans Fat: 0gUnsaturated Fat: 3gCholesterol: 35mgSodium: 184mgCarbohydrates: 46gFiber: 4gSugar: 18gProtein: 9g

Did you make this recipe?

Be sure to tag me on instagram @buildyourbite and hashtag #buildyourbite with your recipe creations!

Sharing is caring!

Jenna

Sunday 4th of February 2024

How long do you let them cool before eating?

Joy Shull

Wednesday 7th of February 2024

Just a few minutes should be fine :) We like them both hot and cold

Jessi

Monday 8th of January 2024

My 4 year old and I made these this morning and they are fantastic!! So delicious and I love that I can sneak some extra protein in for my little carboholic lol.

Joy Shull

Monday 8th of January 2024

So glad you both enjoyed it!! My kiddos love these too :)

Kristin

Sunday 12th of November 2023

Can you use a loaf pan? If so, what degree & how long?

Thanks!

Joy Shull

Monday 13th of November 2023

I haven't tested this in a loaf pan, so I can't be sure. If you try it please let me know how it turns out!

Laura

Tuesday 16th of May 2023

Can you use vanilla Greek yogurt?!

Joy Shull

Monday 24th of July 2023

You can, it will be a littler sweeter since vanilla yogurt is already sweetened.

Audrey

Monday 1st of May 2023

Cami use sugar instead of maple syrup? How much?

Joy Shull

Friday 5th of May 2023

I have not tested it without a liquid sweetener, so I am not sure how it would turn out. Let me know if you try it! If you do, I would substitute an equal amount.

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